Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| metK | mscL | gene:17574365 | gene:17573993 | Putative S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Putative mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.910 |
| metK | ribH | gene:17574365 | gene:17574381 | Putative S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.940 |
| moaB | mscL | gene:17573992 | gene:17573993 | Similar to M.tuberculosis moaB2, putative molybdenum cofactor biosynthesis protein, TR:O53897 (EMBL:AL123456) (181 aa); Fasta score E(): 0, 92.7% identity in 179 aa overlap. Similar to many e.g. to the C-terminal halves of Arabidopsis thaliana cnx1, multifunctional two-domain protein involved in molybdenum cofactor biosynthesis, SW:CNX1_ARATH (Q39054) (670 aa); Fasta score E(): 7.7e-10, 36.4% identity in 187 aa overlap and Synechococcus sp. (strain PCC 7942) moaCB, molybdenum cofactor biosynthesis protein, SW:MOCB_SYNP7 (Q56208) (319 aa); Fasta score E(): 1.3e-09, 35.9% identity in 142 [...] | Putative mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.833 |
| mscL | metK | gene:17573993 | gene:17574365 | Putative mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | Putative S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.910 |
| mscL | moaB | gene:17573993 | gene:17573992 | Putative mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | Similar to M.tuberculosis moaB2, putative molybdenum cofactor biosynthesis protein, TR:O53897 (EMBL:AL123456) (181 aa); Fasta score E(): 0, 92.7% identity in 179 aa overlap. Similar to many e.g. to the C-terminal halves of Arabidopsis thaliana cnx1, multifunctional two-domain protein involved in molybdenum cofactor biosynthesis, SW:CNX1_ARATH (Q39054) (670 aa); Fasta score E(): 7.7e-10, 36.4% identity in 187 aa overlap and Synechococcus sp. (strain PCC 7942) moaCB, molybdenum cofactor biosynthesis protein, SW:MOCB_SYNP7 (Q56208) (319 aa); Fasta score E(): 1.3e-09, 35.9% identity in 142 [...] | 0.833 |
| mscL | ribH | gene:17573993 | gene:17574381 | Putative mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.923 |
| ribH | metK | gene:17574381 | gene:17574365 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | Putative S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.940 |
| ribH | mscL | gene:17574381 | gene:17573993 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | Putative mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.923 |