STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; The C-terminus of this protein is (312 aa)    
Predicted Functional Partners:
ML0979
annotation not available
  
 0.934
pgsA
annotation not available
  
 0.931
pgsA2
annotation not available
  
 0.931
pssA
annotation not available
  
 
 0.920
ML0892
annotation not available
  
 
 0.918
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
 
   
 0.835
cdh
annotation not available
     
  0.800
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP
  
  
 0.701
fadD9
annotation not available
  
  
 0.566
engA
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis
 
    0.518
Your Current Organism:
Mycobacterium leprae
NCBI taxonomy Id: 272631
Other names: M. leprae TN, Mycobacterium leprae, Mycobacterium leprae TN, Mycobacterium leprae str. TN, Mycobacterium leprae strain TN
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