node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ML1094 | ML1596 | gene:17574920 | gene:17575437 | Short chain alcohol dehydrogenase; Highly similar to several Mycobacterium tuberculosis putative oxidoreductases e.g. Rv1245c TR:O50460 (EMBL:AL021006) (276 aa); Fasta score E(): 0, 78.3% identity in 277 aa overlap. Also similar to many others including: Pseudomonas paucimobilis SW:LINX_PSEPA (P50198) (250 aa); Fasta score E(): 9.3e-17, 35.6% identity in 194 aa overlap 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase. Contains Pfam match to entry PF00106 adh_short, short chain dehydrogenase. Contains PS00061 Short-chain dehydrogenases/reductases family signature. | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | 0.563 |
ML1596 | ML1094 | gene:17575437 | gene:17574920 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | Short chain alcohol dehydrogenase; Highly similar to several Mycobacterium tuberculosis putative oxidoreductases e.g. Rv1245c TR:O50460 (EMBL:AL021006) (276 aa); Fasta score E(): 0, 78.3% identity in 277 aa overlap. Also similar to many others including: Pseudomonas paucimobilis SW:LINX_PSEPA (P50198) (250 aa); Fasta score E(): 9.3e-17, 35.6% identity in 194 aa overlap 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase. Contains Pfam match to entry PF00106 adh_short, short chain dehydrogenase. Contains PS00061 Short-chain dehydrogenases/reductases family signature. | 0.563 |
ML1596 | ML1812 | gene:17575437 | gene:17575659 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | Putative exported p60 protein homologue; Similar to M. tuberculosis Rv1477 TR:O53168 (EMBL:AL021184) (472 aa); Fasta score E(): 0, 78.8% identity in 480 aa overlap and to Listeria innocua protein p60 precursor (invasion-associated protein) SW:P60_LISMO (P21171) (484 aa); Fasta score E(): 1e-06, 23.8% identity in 491 aa overlap. Contains Pfam match to entry PF00877 NLPC_P60, NLP/P60 family; Similar to ML1811, ML1214 and ML0885. | 0.601 |
ML1596 | ML2639 | gene:17575437 | gene:17576505 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | Aldehyde dehydrogenase; Similar to many Prokaryotic and Eukaryotic aldehyde dehydrogenases including: Mycobacterium tuberculosis hypothetical 55.0 kda protein RV0147 TR:P96824 (EMBL:Z92770) fasta scores: E(): 0, 77.1% id in 493 aa and Homo sapiens aldehyde dehydrogenase, dimeric NADP-preferring ALDH3 SW:DHAP_HUMAN (P30838) fasta scores: E(): 0, 44.7% id in 450 aa. Contains Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenase family. Contains PS00687 Aldehyde dehydrogenases glutamic acid active site. | 0.919 |
ML1596 | aspS | gene:17575437 | gene:17574322 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.611 |
ML1596 | atpH | gene:17575437 | gene:17574969 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | Bi-domained ATP synthase B, [Delta] chain protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). | 0.516 |
ML1596 | gatB | gene:17575437 | gene:17575545 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | glutamyl-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity); Belongs to the GatB/GatE family. GatB subfamily. | 0.973 |
ML1596 | gatC | gene:17575437 | gene:17575548 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | glutamyl-tRNA(Gln) amidotransferase, subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity); Belongs to the GatC family. | 0.895 |
ML1596 | gltS | gene:17575437 | gene:17575533 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | glutamyl-tRNA synthase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.745 |
ML1596 | rpsB | gene:17575437 | gene:17575439 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | Highly similar to many 30s ribosomal proteins (S2) including: Bacillus subtilis SW:RS2_BACSU (P21464) (245 aa); Fasta score E(): 0, 57.6% identity in 250 aa overlap and Mycobacterium tuberculosis RV2890C SW:RS2_MYCTU (Q10796) (287 aa); Fasta score E(): 0, 91.5% identity in 270 aa overlap. Contains Pfam match to entry PF00318 Ribosomal_S2, Ribosomal protein S2. Contains PS00962 Ribosomal protein S2 signature 1; Belongs to the universal ribosomal protein uS2 family. | 0.826 |
ML1596 | tsf | gene:17575437 | gene:17575438 | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | Elongation factor EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity); Belongs to the EF-Ts family. | 0.842 |
ML1812 | ML1596 | gene:17575659 | gene:17575437 | Putative exported p60 protein homologue; Similar to M. tuberculosis Rv1477 TR:O53168 (EMBL:AL021184) (472 aa); Fasta score E(): 0, 78.8% identity in 480 aa overlap and to Listeria innocua protein p60 precursor (invasion-associated protein) SW:P60_LISMO (P21171) (484 aa); Fasta score E(): 1e-06, 23.8% identity in 491 aa overlap. Contains Pfam match to entry PF00877 NLPC_P60, NLP/P60 family; Similar to ML1811, ML1214 and ML0885. | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | 0.601 |
ML2639 | ML1596 | gene:17576505 | gene:17575437 | Aldehyde dehydrogenase; Similar to many Prokaryotic and Eukaryotic aldehyde dehydrogenases including: Mycobacterium tuberculosis hypothetical 55.0 kda protein RV0147 TR:P96824 (EMBL:Z92770) fasta scores: E(): 0, 77.1% id in 493 aa and Homo sapiens aldehyde dehydrogenase, dimeric NADP-preferring ALDH3 SW:DHAP_HUMAN (P30838) fasta scores: E(): 0, 44.7% id in 450 aa. Contains Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenase family. Contains PS00687 Aldehyde dehydrogenases glutamic acid active site. | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | 0.919 |
ML2639 | tsf | gene:17576505 | gene:17575438 | Aldehyde dehydrogenase; Similar to many Prokaryotic and Eukaryotic aldehyde dehydrogenases including: Mycobacterium tuberculosis hypothetical 55.0 kda protein RV0147 TR:P96824 (EMBL:Z92770) fasta scores: E(): 0, 77.1% id in 493 aa and Homo sapiens aldehyde dehydrogenase, dimeric NADP-preferring ALDH3 SW:DHAP_HUMAN (P30838) fasta scores: E(): 0, 44.7% id in 450 aa. Contains Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenase family. Contains PS00687 Aldehyde dehydrogenases glutamic acid active site. | Elongation factor EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity); Belongs to the EF-Ts family. | 0.697 |
aspS | ML1596 | gene:17574322 | gene:17575437 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | 0.611 |
aspS | gatB | gene:17574322 | gene:17575545 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | glutamyl-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity); Belongs to the GatB/GatE family. GatB subfamily. | 0.981 |
aspS | gatC | gene:17574322 | gene:17575548 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | glutamyl-tRNA(Gln) amidotransferase, subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity); Belongs to the GatC family. | 0.923 |
aspS | gltS | gene:17574322 | gene:17575533 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | glutamyl-tRNA synthase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.872 |
atpH | ML1596 | gene:17574969 | gene:17575437 | Bi-domained ATP synthase B, [Delta] chain protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). | Possible amidase; Highly similar to several proposed amidases including: Pseudomonas putida SW:AMID_PSEPU (O69768) (466 aa); Fasta score E(): 2.9e-19, 29.0% identity in 469 aa overlap and Mycobacterium tuberculosis Rv2888c SW:AMI3_MYCTU (Q10811) (473 aa); Fasta score E(): 0, 76.7% identity in 468 aa overlap. Contains Pfam match to entry PF01425 Amidase, Amidase. Contains PS00571 Amidases signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop). | 0.516 |
atpH | gatB | gene:17574969 | gene:17575545 | Bi-domained ATP synthase B, [Delta] chain protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). | glutamyl-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity); Belongs to the GatB/GatE family. GatB subfamily. | 0.847 |