Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PM0999 | cobB | PM0999 | PM0993 | Unknown; Belongs to the NAPRTase family. | Unknown; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily. | 0.928 |
PM0999 | deoD | PM0999 | PM1291 | Unknown; Belongs to the NAPRTase family. | DeoD. | 0.912 |
PM0999 | nadR | PM0999 | PM1387 | Unknown; Belongs to the NAPRTase family. | NadR. | 0.955 |
apt | deoD | PM0363 | PM1291 | Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | DeoD. | 0.912 |
apt | gpt | PM0363 | PM1369 | Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Gpt; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. | 0.928 |
apt | hpt | PM0363 | PM0121 | Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.921 |
cdd | deoD | PM0259 | PM1291 | Cdd; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | DeoD. | 0.923 |
cdd | tdk | PM0259 | PM1236 | Cdd; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | Tdk. | 0.932 |
cdd | udp | PM0259 | PM1572 | Cdd; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | Udp; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.971 |
cobB | PM0999 | PM0993 | PM0999 | Unknown; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily. | Unknown; Belongs to the NAPRTase family. | 0.928 |
cobB | deoD | PM0993 | PM1291 | Unknown; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily. | DeoD. | 0.920 |
cobB | nadR | PM0993 | PM1387 | Unknown; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily. | NadR. | 0.992 |
deoD | PM0999 | PM1291 | PM0999 | DeoD. | Unknown; Belongs to the NAPRTase family. | 0.912 |
deoD | apt | PM1291 | PM0363 | DeoD. | Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.912 |
deoD | cdd | PM1291 | PM0259 | DeoD. | Cdd; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 0.923 |
deoD | cobB | PM1291 | PM0993 | DeoD. | Unknown; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily. | 0.920 |
deoD | gpt | PM1291 | PM1369 | DeoD. | Gpt; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. | 0.912 |
deoD | hpt | PM1291 | PM0121 | DeoD. | Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.912 |
deoD | nadR | PM1291 | PM1387 | DeoD. | NadR. | 0.943 |
deoD | tdk | PM1291 | PM1236 | DeoD. | Tdk. | 0.924 |
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