STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cSZinc-transporting ATPase (translocating P-type) (EC 3.6.3.5). (689 aa)    
Predicted Functional Partners:
PAB0625
Transcriptional repressor smtb-like; Transcription regulatory protein, arsR family, zinc exporter/cadmium efflux system accessory protein homolog.
 
  
 0.932
PAB0462
Cation efflux system protein (cobalt/zinc/cadmium).
 
 
 0.671
PAB1973
Hypothetical protein.
 
  
 0.586
b0652
Transcriptional regulatory protein, Lrp-AsnC family.
     
 0.569
PAB1443
gufA protein homolog, putative heavy metal ion transport protein.
 
  
 0.556
PAB1107
arsB arsenical pump membrane protein.
     
 0.531
tgtA
Queuine-archaeosine tRNA ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
 
     0.518
PAB0674
Cytochrome C biogenesis protein.
     
 0.506
PAB2298
Transcriptional regulator, arsR family.
 
  
 0.506
PAB1273
Membrane protein, putative.
  
  
 0.474
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.