Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB0645 | agpa | PAB0645 | PAB2414 | Sugar-phosphate nucleotidyl transferase. | Alpha-glucan phosphorylase. | 0.441 |
PAB0645 | graD-3 | PAB0645 | PAB0784 | Sugar-phosphate nucleotidyl transferase. | Nucleotidyltransferase. | 0.675 |
PAB0645 | manC | PAB0645 | PAB0818 | Sugar-phosphate nucleotidyl transferase. | manC mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase, bifunctional enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.978 |
PAB0645 | mpg | PAB0645 | PAB0317 | Sugar-phosphate nucleotidyl transferase. | Nucleotidyltransferase. | 0.910 |
PAB0645 | pmm | PAB0645 | PAB0819 | Sugar-phosphate nucleotidyl transferase. | PMM phosphomannomutase. | 0.996 |
PAB0771 | agpa | PAB0771 | PAB2414 | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | Alpha-glucan phosphorylase. | 0.935 |
PAB0771 | graD-1 | PAB0771 | PAB1053 | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | Nucleotidyltransferase. | 0.843 |
PAB0771 | graD-2 | PAB0771 | PAB1115 | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | Nucleotidyltransferase. | 0.844 |
PAB0771 | graD-3 | PAB0771 | PAB0784 | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | Nucleotidyltransferase. | 0.905 |
PAB0771 | manC | PAB0771 | PAB0818 | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | manC mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase, bifunctional enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.610 |
PAB0771 | pmm | PAB0771 | PAB0819 | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | PMM phosphomannomutase. | 0.937 |
agpa | PAB0645 | PAB2414 | PAB0645 | Alpha-glucan phosphorylase. | Sugar-phosphate nucleotidyl transferase. | 0.441 |
agpa | PAB0771 | PAB2414 | PAB0771 | Alpha-glucan phosphorylase. | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | 0.935 |
agpa | graD-1 | PAB2414 | PAB1053 | Alpha-glucan phosphorylase. | Nucleotidyltransferase. | 0.423 |
agpa | mpg | PAB2414 | PAB0317 | Alpha-glucan phosphorylase. | Nucleotidyltransferase. | 0.456 |
agpa | pmm | PAB2414 | PAB0819 | Alpha-glucan phosphorylase. | PMM phosphomannomutase. | 0.942 |
glkA | pmm | PAB0967 | PAB0819 | ADP-dependent glucokinase; Catalyzes the ADP-dependent phosphorylation of D-glucose to D-glucose 6-phosphate and glucosamine to glucosamine 6-phosphate. | PMM phosphomannomutase. | 0.938 |
graD-1 | PAB0771 | PAB1053 | PAB0771 | Nucleotidyltransferase. | UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase). | 0.843 |
graD-1 | agpa | PAB1053 | PAB2414 | Nucleotidyltransferase. | Alpha-glucan phosphorylase. | 0.423 |
graD-1 | graD-2 | PAB1053 | PAB1115 | Nucleotidyltransferase. | Nucleotidyltransferase. | 0.920 |
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