STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorA-1iorA indolepyruvate ferredoxin oxidoreductase, subunit alpha; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (648 aa)    
Predicted Functional Partners:
iorB-1
iorB indolepyruvate ferredoxin oxidoreductase, subunit beta; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 0.982
PAB0854
acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain.
   
 
 0.893
iorB-2
iorB-like indolepyruvate ferredoxin oxidoreductase related protein.
 
 
 0.858
soj
ATPase involved in chromosome partitioning, minD/MRP superfamily.
  
    0.576
korG-1
korG-1 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma.
 
 
 0.544
PAB0853
Hypothetical protein.
       0.526
korG-2
korG-2 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma.
 
 
 0.501
ftsZ-2
ftsZ-2 cell division GTPase, ftsZ homolog; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
       0.430
PAB1937
acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain.
   
 
 0.430
porG
porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit.
  
 
 0.405
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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