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PYRAB15770 protein (Pyrococcus abyssi) - STRING interaction network
"PYRAB15770" - tRNA in Pyrococcus abyssi
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PYRAB15770tRNA (cytidine(56)-2’-O)-methyltransferase; Specifically catalyzes the AdoMet-dependent 2’-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family (198 aa)    
Predicted Functional Partners:
PAB2119
annotation not available (258 aa)
           
  0.897
PAB0401
annotation not available (205 aa)
           
  0.897
PAB1039
annotation not available (532 aa)
              0.851
pgsA-like
annotation not available (186 aa)
              0.850
tfe
Transcription factor E; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems [...] (190 aa)
 
          0.835
PYRAB11420
Putative adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates (180 aa)
   
     
  0.742
PYRAB15740
Nicotinamide-nucleotide adenylyltransferase; Catalyzes the formation of NAD+ from nicotinamide ribonucleotide and ATP (186 aa)
 
          0.733
trm5b
tRNA (guanine(37)-N1)-methyltransferase Trm5b; Specifically methylates the N1 position of guanosine-37 in various tRNAs (330 aa)
 
     
  0.704
cobS
Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family (232 aa)
              0.699
tgtA
tRNA-guanine(15) transglycosylase; Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family (584 aa)
 
          0.690
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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