STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpiAtpiA triosephosphate isomerase, archaeal triose phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (228 aa)    
Predicted Functional Partners:
gap
Gap glyceraldehyde 3-phosphate dehydrogenase.
 
 0.999
pgk
Pgk 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 
 0.992
eno
Eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.981
fbp-2
Fbp fructose 1,6-bisphosphatase (EC 3.1.3.11); Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
    
 0.973
fba
Archaeal fructose 1,6-bisphosphate aldolase class 1A; Belongs to the DeoC/FbaB aldolase family.
 
 
 0.967
fucA
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.961
eno-like
Eno-like enolase related.
  
 
 0.925
PAB1315
Gor glyceraldehyde-3-phosphate: ferredoxin oxidoreductase.
    
  0.911
pgiA
Glucose-6-phosphate isomerase.
 
  
 0.866
PAB1441
Pyk pyruvate kinase (EC 2.7.1.40) (PK); Belongs to the pyruvate kinase family.
  
  
 0.866
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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