STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcmA1mcmA1 methylmalonyl-coA mutase, subunit alpha. (562 aa)    
Predicted Functional Partners:
PAB2187
Methylmalonyl coA mutase, beta chain.
 0.999
PAB2398
Lysine arginine ornithine transport system kinase; May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone (By similarity).
  
 0.991
PAB2438
Methylmalonyl-coA epimerase.
 
  
 0.968
korB-1
korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta.
    
 0.909
korG-1
korG-1 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma.
    
 0.909
korA-2
korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha.
    
 0.909
korB-2
korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta.
    
 0.909
korG-2
korG-2 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma.
    
 0.909
korA-1
korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha.
    
 0.909
korD
korD 2-ketoglutarate ferredoxin oxidoreductase, subunit delta.
     
 0.902
Your Current Organism:
Pyrococcus abyssi
NCBI taxonomy Id: 272844
Other names: P. abyssi GE5, Pyrococcus abyssi GE5, Pyrococcus abyssi str. GE5, Pyrococcus abyssi str. Orsay, Pyrococcus abyssi strain GE5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.