Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB1900 | PAB1903 | PAB1900 | PAB1903 | Conserved hypothetical protein (C-terminal part). | Hypothetical protein. | 0.627 |
PAB1900 | PAB1904 | PAB1900 | PAB1904 | Conserved hypothetical protein (C-terminal part). | Hypothetical protein. | 0.627 |
PAB1900 | PABs11404 | PAB1900 | PABs11404 | Conserved hypothetical protein (C-terminal part). | Conserved hypothetical protein (N-terminal part). | 0.918 |
PAB1900 | gatD | PAB1900 | PAB1901 | Conserved hypothetical protein (C-terminal part). | L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the asparaginase 1 family. GatD subfamily. | 0.627 |
PAB1900 | gatE | PAB1900 | PAB1902 | Conserved hypothetical protein (C-terminal part). | Archaeal Glu-tRNAGln amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the GatB/GatE family. GatE subfamily. | 0.627 |
PAB1903 | PAB1900 | PAB1903 | PAB1900 | Hypothetical protein. | Conserved hypothetical protein (C-terminal part). | 0.627 |
PAB1903 | PAB1904 | PAB1903 | PAB1904 | Hypothetical protein. | Hypothetical protein. | 0.799 |
PAB1903 | PABs11404 | PAB1903 | PABs11404 | Hypothetical protein. | Conserved hypothetical protein (N-terminal part). | 0.593 |
PAB1903 | gatD | PAB1903 | PAB1901 | Hypothetical protein. | L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the asparaginase 1 family. GatD subfamily. | 0.788 |
PAB1903 | gatE | PAB1903 | PAB1902 | Hypothetical protein. | Archaeal Glu-tRNAGln amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the GatB/GatE family. GatE subfamily. | 0.788 |
PAB1904 | PAB1900 | PAB1904 | PAB1900 | Hypothetical protein. | Conserved hypothetical protein (C-terminal part). | 0.627 |
PAB1904 | PAB1903 | PAB1904 | PAB1903 | Hypothetical protein. | Hypothetical protein. | 0.799 |
PAB1904 | PABs11404 | PAB1904 | PABs11404 | Hypothetical protein. | Conserved hypothetical protein (N-terminal part). | 0.593 |
PAB1904 | gatD | PAB1904 | PAB1901 | Hypothetical protein. | L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the asparaginase 1 family. GatD subfamily. | 0.788 |
PAB1904 | gatE | PAB1904 | PAB1902 | Hypothetical protein. | Archaeal Glu-tRNAGln amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the GatB/GatE family. GatE subfamily. | 0.788 |
PAB2294 | gatE | PAB2294 | PAB1902 | asnA-1 L-asparaginase (EC 3.5.1.1). | Archaeal Glu-tRNAGln amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the GatB/GatE family. GatE subfamily. | 0.877 |
PAB2294 | gltX | PAB2294 | PAB0323 | asnA-1 L-asparaginase (EC 3.5.1.1). | gltX glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.649 |
PAB3357 | gatE | PAB3357 | PAB1902 | moaD molybdopterin synthase, small subunit. | Archaeal Glu-tRNAGln amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate; Belongs to the GatB/GatE family. GatE subfamily. | 0.625 |
PABs11404 | PAB1900 | PABs11404 | PAB1900 | Conserved hypothetical protein (N-terminal part). | Conserved hypothetical protein (C-terminal part). | 0.918 |
PABs11404 | PAB1903 | PABs11404 | PAB1903 | Conserved hypothetical protein (N-terminal part). | Hypothetical protein. | 0.593 |
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