Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB2065 | PAB2066 | PAB2065 | PAB2066 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.758 |
PAB2065 | PAB2067 | PAB2065 | PAB2067 | Hypothetical protein. | Hypothetical protein. | 0.754 |
PAB2065 | PAB2069 | PAB2065 | PAB2069 | Hypothetical protein. | ABC type transporter permease component, substrate unknown. | 0.563 |
PAB2065 | drrA-2 | PAB2065 | PAB2068 | Hypothetical protein. | ABC-type multidrug transporter, ATPase component, substrate unknown. | 0.642 |
PAB2066 | PAB2065 | PAB2066 | PAB2065 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.758 |
PAB2066 | PAB2067 | PAB2066 | PAB2067 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.795 |
PAB2066 | PAB2069 | PAB2066 | PAB2069 | Methyl-accepting chemotaxis protein. | ABC type transporter permease component, substrate unknown. | 0.608 |
PAB2066 | cheA | PAB2066 | PAB1332 | Methyl-accepting chemotaxis protein. | cheA chemotaxis histidine kinase. | 0.978 |
PAB2066 | cheB | PAB2066 | PAB1331 | Methyl-accepting chemotaxis protein. | cheB protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.984 |
PAB2066 | cheD | PAB2066 | PAB1335 | Methyl-accepting chemotaxis protein. | cheD chemotaxis protein cheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.968 |
PAB2066 | cheR | PAB2066 | PAB1329 | Methyl-accepting chemotaxis protein. | cheR chemotaxis protein methyltransferase. | 0.986 |
PAB2066 | cheW | PAB2066 | PAB1027 | Methyl-accepting chemotaxis protein. | cheW purine-binding chemotaxis protein. | 0.994 |
PAB2066 | cheY | PAB2066 | PAB1330 | Methyl-accepting chemotaxis protein. | cheY chemotaxis response regulator. | 0.962 |
PAB2066 | drrA-2 | PAB2066 | PAB2068 | Methyl-accepting chemotaxis protein. | ABC-type multidrug transporter, ATPase component, substrate unknown. | 0.685 |
PAB2067 | PAB2065 | PAB2067 | PAB2065 | Hypothetical protein. | Hypothetical protein. | 0.754 |
PAB2067 | PAB2066 | PAB2067 | PAB2066 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.795 |
PAB2067 | PAB2069 | PAB2067 | PAB2069 | Hypothetical protein. | ABC type transporter permease component, substrate unknown. | 0.596 |
PAB2067 | drrA-2 | PAB2067 | PAB2068 | Hypothetical protein. | ABC-type multidrug transporter, ATPase component, substrate unknown. | 0.683 |
PAB2069 | PAB2065 | PAB2069 | PAB2065 | ABC type transporter permease component, substrate unknown. | Hypothetical protein. | 0.563 |
PAB2069 | PAB2066 | PAB2069 | PAB2066 | ABC type transporter permease component, substrate unknown. | Methyl-accepting chemotaxis protein. | 0.608 |
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