Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB0040 | PAB0461 | PAB0040 | PAB0461 | Integral membrane protein (DUF6 family). | Predicted permease. | 0.457 |
PAB0040 | PAB2381 | PAB0040 | PAB2381 | Integral membrane protein (DUF6 family). | Membrane protein, putative. | 0.478 |
PAB0461 | PAB0040 | PAB0461 | PAB0040 | Predicted permease. | Integral membrane protein (DUF6 family). | 0.457 |
PAB0461 | PAB2381 | PAB0461 | PAB2381 | Predicted permease. | Membrane protein, putative. | 0.508 |
PAB0965 | PAB0966 | PAB0965 | PAB0966 | Hypothetical protein. | Signal peptidase. | 0.856 |
PAB0965 | PAB1418 | PAB0965 | PAB1418 | Hypothetical protein. | Peptidase. | 0.565 |
PAB0965 | PAB2380 | PAB0965 | PAB2380 | Hypothetical protein. | TRP-repeat-containing protein. | 0.611 |
PAB0965 | PAB2381 | PAB0965 | PAB2381 | Hypothetical protein. | Membrane protein, putative. | 0.567 |
PAB0965 | glkA | PAB0965 | PAB0967 | Hypothetical protein. | ADP-dependent glucokinase; Catalyzes the ADP-dependent phosphorylation of D-glucose to D-glucose 6-phosphate and glucosamine to glucosamine 6-phosphate. | 0.587 |
PAB0965 | pcp | PAB0965 | PAB1419 | Hypothetical protein. | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | 0.560 |
PAB0966 | PAB0965 | PAB0966 | PAB0965 | Signal peptidase. | Hypothetical protein. | 0.856 |
PAB0966 | PAB1418 | PAB0966 | PAB1418 | Signal peptidase. | Peptidase. | 0.653 |
PAB0966 | PAB2380 | PAB0966 | PAB2380 | Signal peptidase. | TRP-repeat-containing protein. | 0.626 |
PAB0966 | PAB2381 | PAB0966 | PAB2381 | Signal peptidase. | Membrane protein, putative. | 0.583 |
PAB0966 | glkA | PAB0966 | PAB0967 | Signal peptidase. | ADP-dependent glucokinase; Catalyzes the ADP-dependent phosphorylation of D-glucose to D-glucose 6-phosphate and glucosamine to glucosamine 6-phosphate. | 0.587 |
PAB0966 | pcp | PAB0966 | PAB1419 | Signal peptidase. | Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. | 0.576 |
PAB1418 | PAB0965 | PAB1418 | PAB0965 | Peptidase. | Hypothetical protein. | 0.565 |
PAB1418 | PAB0966 | PAB1418 | PAB0966 | Peptidase. | Signal peptidase. | 0.653 |
PAB1418 | PAB1420 | PAB1418 | PAB1420 | Peptidase. | Hypothetical protein, containing ATP/GTP-binding site motif A. | 0.499 |
PAB1418 | PAB2380 | PAB1418 | PAB2380 | Peptidase. | TRP-repeat-containing protein. | 0.788 |
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