Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB0405 | PAB0406 | PAB0405 | PAB0406 | Predicted serine/threonine protein kinase, rio1 family. | Predicted RNA-binding protein. | 0.946 |
PAB0405 | PAB0411 | PAB0405 | PAB0411 | Predicted serine/threonine protein kinase, rio1 family. | Hypothetical protein. | 0.763 |
PAB0405 | PAB2412 | PAB0405 | PAB2412 | Predicted serine/threonine protein kinase, rio1 family. | Hypothetical protein. | 0.849 |
PAB0405 | PAB2413 | PAB0405 | PAB2413 | Predicted serine/threonine protein kinase, rio1 family. | Hypothetical protein. | 0.849 |
PAB0405 | aif1A | PAB0405 | PAB2441 | Predicted serine/threonine protein kinase, rio1 family. | eIF1A translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (By similarity). | 0.985 |
PAB0405 | top6A | PAB0405 | PAB2411 | Predicted serine/threonine protein kinase, rio1 family. | Top6A DNA topoisomerase VI, subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. | 0.849 |
PAB0405 | top6B | PAB0405 | PAB0407 | Predicted serine/threonine protein kinase, rio1 family. | Top6B DNA topoisomerase VI, subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | 0.849 |
PAB0406 | PAB0405 | PAB0406 | PAB0405 | Predicted RNA-binding protein. | Predicted serine/threonine protein kinase, rio1 family. | 0.946 |
PAB0406 | PAB0411 | PAB0406 | PAB0411 | Predicted RNA-binding protein. | Hypothetical protein. | 0.763 |
PAB0406 | PAB2412 | PAB0406 | PAB2412 | Predicted RNA-binding protein. | Hypothetical protein. | 0.849 |
PAB0406 | PAB2413 | PAB0406 | PAB2413 | Predicted RNA-binding protein. | Hypothetical protein. | 0.849 |
PAB0406 | aif1A | PAB0406 | PAB2441 | Predicted RNA-binding protein. | eIF1A translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (By similarity). | 0.966 |
PAB0406 | dnaG | PAB0406 | PAB0316 | Predicted RNA-binding protein. | Primase dnaG-like; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.610 |
PAB0406 | pcn | PAB0406 | PAB1465 | Predicted RNA-binding protein. | DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (By similarity). Regulates activity of NucS endonuclease and prevents non- specific cleavage. | 0.573 |
PAB0406 | top6A | PAB0406 | PAB2411 | Predicted RNA-binding protein. | Top6A DNA topoisomerase VI, subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. | 0.849 |
PAB0406 | top6B | PAB0406 | PAB0407 | Predicted RNA-binding protein. | Top6B DNA topoisomerase VI, subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | 0.873 |
PAB0411 | PAB0405 | PAB0411 | PAB0405 | Hypothetical protein. | Predicted serine/threonine protein kinase, rio1 family. | 0.763 |
PAB0411 | PAB0406 | PAB0411 | PAB0406 | Hypothetical protein. | Predicted RNA-binding protein. | 0.763 |
PAB0411 | PAB2412 | PAB0411 | PAB2412 | Hypothetical protein. | Hypothetical protein. | 0.774 |
PAB0411 | PAB2413 | PAB0411 | PAB2413 | Hypothetical protein. | Hypothetical protein. | 0.775 |
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