Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAB1639 | PAB1640 | PAB1639 | PAB1640 | Hypothetical protein. | Hypothetical protein. | 0.828 |
PAB1639 | PAB1641 | PAB1639 | PAB1641 | Hypothetical protein. | Hypothetical protein, containing TENA/THI-4 domain. | 0.573 |
PAB1639 | PAB1642 | PAB1639 | PAB1642 | Hypothetical protein. | Transcription activator, putative. | 0.573 |
PAB1639 | PAB1643 | PAB1639 | PAB1643 | Hypothetical protein. | codB-like purine-cytosine permease related. | 0.573 |
PAB1639 | thiD | PAB1639 | PAB1646 | Hypothetical protein. | thiD hydroxymethylpyrimidine phosphate kinase. | 0.573 |
PAB1639 | thiE | PAB1639 | PAB1645 | Hypothetical protein. | thiE thiamine phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.573 |
PAB1639 | thiM | PAB1639 | PAB2432 | Hypothetical protein. | thiM hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.573 |
PAB1640 | PAB1639 | PAB1640 | PAB1639 | Hypothetical protein. | Hypothetical protein. | 0.828 |
PAB1640 | PAB1641 | PAB1640 | PAB1641 | Hypothetical protein. | Hypothetical protein, containing TENA/THI-4 domain. | 0.576 |
PAB1640 | PAB1642 | PAB1640 | PAB1642 | Hypothetical protein. | Transcription activator, putative. | 0.576 |
PAB1640 | PAB1643 | PAB1640 | PAB1643 | Hypothetical protein. | codB-like purine-cytosine permease related. | 0.576 |
PAB1640 | thiD | PAB1640 | PAB1646 | Hypothetical protein. | thiD hydroxymethylpyrimidine phosphate kinase. | 0.576 |
PAB1640 | thiE | PAB1640 | PAB1645 | Hypothetical protein. | thiE thiamine phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.576 |
PAB1640 | thiM | PAB1640 | PAB2432 | Hypothetical protein. | thiM hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.576 |
PAB1641 | PAB1639 | PAB1641 | PAB1639 | Hypothetical protein, containing TENA/THI-4 domain. | Hypothetical protein. | 0.573 |
PAB1641 | PAB1640 | PAB1641 | PAB1640 | Hypothetical protein, containing TENA/THI-4 domain. | Hypothetical protein. | 0.576 |
PAB1641 | PAB1642 | PAB1641 | PAB1642 | Hypothetical protein, containing TENA/THI-4 domain. | Transcription activator, putative. | 0.981 |
PAB1641 | PAB1643 | PAB1641 | PAB1643 | Hypothetical protein, containing TENA/THI-4 domain. | codB-like purine-cytosine permease related. | 0.788 |
PAB1641 | thiC | PAB1641 | PAB1930 | Hypothetical protein, containing TENA/THI-4 domain. | thiC thiamine biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.571 |
PAB1641 | thiD | PAB1641 | PAB1646 | Hypothetical protein, containing TENA/THI-4 domain. | thiD hydroxymethylpyrimidine phosphate kinase. | 0.999 |
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