STRINGSTRING
XP_003672969.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003672969.1" - Uncharacterized protein in Naumovozyma castellii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003672969.1Uncharacterized protein; Ancestral locus Anc_1.125 (668 aa)    
Predicted Functional Partners:
XP_003678430.1
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA-splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5’- and 3’-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’-cyclic phosphate and 5’-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (288 aa)
           
  0.853
XP_003677977.1
Uncharacterized protein; Ancestral locus Anc_2.625 (129 aa)
           
  0.853
XP_003675699.1
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA-splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5’- and 3’-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’-cyclic phosphate and 5’-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (371 aa)
           
  0.853
XP_003674667.1
Uncharacterized protein; Ancestral locus Anc_8.559 (470 aa)
           
  0.853
XP_003678074.1
Uncharacterized protein; Ancestral locus Anc_7.111 (736 aa)
           
  0.722
XP_003675396.1
Uncharacterized protein; Ancestral locus Anc_8.847 (495 aa)
           
  0.694
XP_003678355.1
Uncharacterized protein; Ancestral locus Anc_8.20 (963 aa)
       
 
  0.655
XP_003677081.1
Uncharacterized protein; Ancestral locus Anc_5.281 (219 aa)
           
  0.623
XP_003677589.1
Uncharacterized protein; Ancestral locus Anc_1.525 (238 aa)
           
  0.576
XP_003673051.1
Uncharacterized protein; Ancestral locus Anc_6.232 (333 aa)
           
  0.482
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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