STRINGSTRING
XP_003673077.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673077.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673077.1Uncharacterized protein; Ancestral locus Anc_5.299 (223 aa)    
Predicted Functional Partners:
XP_003676533.1
Uncharacterized protein; Ancestral locus Anc_3.448 (267 aa)
     
 
  0.997
XP_003674434.1
Uncharacterized protein; Ancestral locus Anc_7.503 (678 aa)
       
 
  0.996
XP_003676259.1
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (128 aa)
       
 
  0.970
XP_003676629.1
Uncharacterized protein; Ancestral locus Anc_7.174 (128 aa)
       
 
  0.962
XP_003674043.1
Uncharacterized protein; Ancestral locus Anc_3.345 (338 aa)
       
      0.951
XP_003674673.1
Uncharacterized protein; Ancestral locus Anc_8.551 (218 aa)
       
 
  0.947
XP_003674460.1
Uncharacterized protein; Ancestral locus Anc_2.436 (123 aa)
       
 
  0.926
XP_003676873.1
Uncharacterized protein; Ancestral locus Anc_6.65 (281 aa)
       
 
  0.924
XP_003673412.1
Uncharacterized protein; Ancestral locus Anc_6.301 (153 aa)
       
 
  0.923
XP_003673109.1
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (297 aa)
       
 
  0.892
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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