STRINGSTRING
XP_003673106.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673106.1" - Uncharacterized protein in Naumovozyma castellii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673106.1Uncharacterized protein; Ancestral locus Anc_5.208; Belongs to the DEAD box helicase family (748 aa)    
Predicted Functional Partners:
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (839 aa)
     
 
  0.976
XP_003677497.1
Uncharacterized protein; Ancestral locus Anc_2.167 (224 aa)
     
 
  0.973
XP_003674476.1
Uncharacterized protein; Ancestral locus Anc_8.872 (881 aa)
     
 
  0.972
XP_003677542.1
Uncharacterized protein; Ancestral locus Anc_2.247; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (490 aa)
     
 
  0.971
XP_003678261.1
Uncharacterized protein; Ancestral locus Anc_3.85 (661 aa)
     
 
  0.971
XP_003675844.1
Uncharacterized protein; Ancestral locus Anc_1.397 (475 aa)
   
 
  0.969
XP_003673356.1
Uncharacterized protein; Ancestral locus Anc_2.409 (1247 aa)
     
 
  0.969
XP_003674548.1
Uncharacterized protein; Ancestral locus Anc_8.787 (515 aa)
   
 
  0.969
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (595 aa)
     
 
  0.968
XP_003676272.1
Uncharacterized protein; Ancestral locus Anc_6.132 (799 aa)
     
 
  0.967
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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