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XP_003673151.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673151.1" - 60S acidic ribosomal protein P0 in Naumovozyma castellii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673151.160S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl- transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome [...] (313 aa)    
Predicted Functional Partners:
XP_003678066.1
Uncharacterized protein; Ancestral locus Anc_7.96; Belongs to the eukaryotic ribosomal protein P1/P2 family (107 aa)
   
 
  0.999
XP_003676269.1
Uncharacterized protein; Ancestral locus Anc_6.129; Belongs to the universal ribosomal protein uS5 family (258 aa)
   
 
  0.999
XP_003675508.1
Uncharacterized protein; Ancestral locus Anc_8.639 (297 aa)
   
 
  0.996
XP_003675905.1
Uncharacterized protein; Ancestral locus Anc_5.664; Belongs to the universal ribosomal protein uL3 family (387 aa)
 
 
  0.995
XP_003677432.1
Uncharacterized protein; Ancestral locus Anc_2.76; Belongs to the universal ribosomal protein uS3 family (244 aa)
   
 
  0.995
XP_003674082.1
Uncharacterized protein; Ancestral locus Anc_3.416; Belongs to the universal ribosomal protein uL5 family (175 aa)
   
 
  0.995
XP_003673046.1
Ribosomal protein; Ancestral locus Anc_6.237; Belongs to the universal ribosomal protein uL1 family (217 aa)
 
 
  0.994
XP_003676789.1
Uncharacterized protein; Ancestral locus Anc_7.293; Belongs to the eukaryotic ribosomal protein P1/P2 family (106 aa)
   
 
  0.993
XP_003676288.1
Uncharacterized protein; Ancestral locus Anc_6.156; Belongs to the universal ribosomal protein uL15 family (149 aa)
   
 
  0.993
XP_003673128.1
Uncharacterized protein; Ancestral locus Anc_4.85 (105 aa)
     
 
  0.992
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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