STRINGSTRING
XP_003673167.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673167.1" - Uncharacterized protein in Naumovozyma castellii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673167.1Uncharacterized protein; Ancestral locus Anc_4.192 (356 aa)    
Predicted Functional Partners:
XP_003675012.1
Mitogen-activated protein kinase; Ancestral locus Anc_8.162 (352 aa)
   
 
  0.571
XP_003677840.1
Uncharacterized protein; Ancestral locus Anc_5.384 (103 aa)
     
   
  0.508
XP_003676586.1
Uncharacterized protein; Ancestral locus Anc_3.178; Belongs to the protein kinase superfamily (416 aa)
   
 
  0.495
XP_003673821.1
Uncharacterized protein; Ancestral locus Anc_1.383 (560 aa)
     
 
  0.479
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome- mediated 3’-5’ exonucleolytic degradation, or deadenlyation- dependent mRNA decaping and subsequent 5’-3’ e [...] (645 aa)
     
   
  0.449
XP_003676311.1
Uncharacterized protein; Ancestral locus Anc_6.191 (814 aa)
           
  0.436
XP_003677807.1
Uncharacterized protein; Ancestral locus Anc_6.107 (472 aa)
     
 
  0.408
XP_003676276.1
Uncharacterized protein; Ancestral locus Anc_6.136 (322 aa)
     
 
  0.408
XP_003676266.1
Uncharacterized protein; Ancestral locus Anc_6.107 (523 aa)
     
 
  0.408
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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