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XP_003673177.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673177.1" - Transcription elongation factor SPT4 in Naumovozyma castellii
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
XP_003673177.1Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (102 aa)    
Predicted Functional Partners:
XP_003677918.1
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (965 aa)
     
 
  0.989
XP_003674104.1
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression (1447 aa)
     
 
  0.980
XP_003673525.1
Uncharacterized protein; Ancestral locus Anc_4.67 (307 aa)
     
 
  0.980
XP_003676613.1
Uncharacterized protein; Ancestral locus Anc_7.194 (318 aa)
     
 
  0.967
XP_003674328.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1716 aa)
     
 
  0.966
XP_003675271.1
Uncharacterized protein; Ancestral locus Anc_1.208 (246 aa)
     
 
  0.953
XP_003674143.1
Uncharacterized protein; Ancestral locus Anc_5.495 (171 aa)
     
 
  0.952
XP_003676322.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (122 aa)
     
 
  0.951
XP_003677897.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1224 aa)
       
 
  0.948
XP_003676155.1
Uncharacterized protein; Ancestral locus Anc_6.30 (122 aa)
     
 
  0.940
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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