STRINGSTRING
XP_003673215.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673215.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673215.1Uncharacterized protein; Ancestral locus Anc_4.284 (172 aa)    
Predicted Functional Partners:
XP_003675478.1
Uncharacterized protein; Ancestral locus Anc_8.699 (582 aa)
       
  0.999
XP_003674797.1
Uncharacterized protein; Ancestral locus Anc_8.340 (1241 aa)
       
 
  0.913
XP_003674123.1
Uncharacterized protein; Ancestral locus Anc_5.458 (229 aa)
       
 
  0.872
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (95 aa)
       
 
  0.794
XP_003677642.1
Uncharacterized protein; Ancestral locus Anc_1.468 (755 aa)
       
 
  0.756
XP_003676080.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (521 aa)
       
 
  0.750
XP_003674851.1
Uncharacterized protein; Ancestral locus Anc_8.245 (622 aa)
       
 
  0.750
XP_003675058.1
Uncharacterized protein; Ancestral locus Anc_2.320 (727 aa)
       
 
  0.744
XP_003676291.1
Uncharacterized protein; Ancestral locus Anc_6.159; Belongs to the WD repeat SEC13 family (345 aa)
       
 
  0.726
XP_003674220.1
Uncharacterized protein; Ancestral locus Anc_2.582 (1031 aa)
           
  0.695
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
Server load: low (20%) [HD]