STRINGSTRING
XP_003673217.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673217.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673217.1Uncharacterized protein; Ancestral locus Anc_4.287 (885 aa)    
Predicted Functional Partners:
XP_003674613.1
Uncharacterized protein; Ancestral locus Anc_8.661 (868 aa)
     
0.984
XP_003676633.1
Uncharacterized protein; Ancestral locus Anc_7.166 (746 aa)
     
 
  0.910
XP_003673433.1
Uncharacterized protein; Ancestral locus Anc_2.521 (920 aa)
     
 
  0.856
XP_003674714.1
Uncharacterized protein; Ancestral locus Anc_8.470 (578 aa)
     
   
  0.784
XP_003676494.1
Acyl-coenzyme A oxidase; Ancestral locus Anc_3.514; Belongs to the acyl-CoA oxidase family (749 aa)
     
   
  0.762
XP_003675771.1
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1488 aa)
     
      0.694
XP_003676426.1
Uncharacterized protein; Ancestral locus Anc_6.350 (902 aa)
       
      0.693
XP_003674120.1
Uncharacterized protein; Ancestral locus Anc_5.452 (83 aa)
       
      0.693
XP_003673335.1
Uncharacterized protein; Ancestral locus Anc_8.192 (90 aa)
       
      0.693
XP_003674704.1
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (506 aa)
     
 
  0.671
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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