STRINGSTRING
XP_003673308.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673308.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673308.1Uncharacterized protein; Ancestral locus Anc_8.77 (354 aa)    
Predicted Functional Partners:
XP_003674492.1
Uncharacterized protein; Ancestral locus Anc_8.838 (564 aa)
       
 
  0.881
XP_003676280.1
Uncharacterized protein; Ancestral locus Anc_6.141 (516 aa)
       
 
  0.840
XP_003676956.1
Uncharacterized protein; Ancestral locus Anc_5.546 (328 aa)
     
 
  0.782
XP_003674474.1
Uncharacterized protein; Ancestral locus Anc_8.878 (170 aa)
       
 
  0.777
XP_003675449.1
Uncharacterized protein; Ancestral locus Anc_8.754 (655 aa)
       
 
  0.770
XP_003677751.1
Uncharacterized protein; Ancestral locus Anc_6.40 (336 aa)
     
 
  0.760
XP_003674789.1
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (206 aa)
     
 
  0.706
XP_003677049.1
Uncharacterized protein; Ancestral locus Anc_5.25 (1069 aa)
       
      0.693
XP_003675439.1
Uncharacterized protein; Ancestral locus Anc_8.771 (154 aa)
       
      0.693
XP_003674814.1
Uncharacterized protein; Ancestral locus Anc_8.323 (519 aa)
       
      0.693
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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