STRINGSTRING
XP_003673372.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673372.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673372.1Uncharacterized protein; Ancestral locus Anc_2.431 (318 aa)    
Predicted Functional Partners:
XP_003673460.1
Uncharacterized protein; Ancestral locus Anc_4.141; Belongs to the eukaryotic ribosomal protein eL38 family (78 aa)
     
 
  0.987
XP_003677432.1
Uncharacterized protein; Ancestral locus Anc_2.76; Belongs to the universal ribosomal protein uS3 family (244 aa)
     
 
  0.986
XP_003674199.1
Uncharacterized protein; Ancestral locus Anc_2.550 (119 aa)
     
 
  0.983
XP_003678396.1
Uncharacterized protein; Ancestral locus Anc_4.163 (108 aa)
     
 
  0.982
XP_003673151.1
60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl- transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome [...] (313 aa)
     
 
  0.981
XP_003676269.1
Uncharacterized protein; Ancestral locus Anc_6.129; Belongs to the universal ribosomal protein uS5 family (258 aa)
     
 
  0.980
XP_003678046.1
40S ribosomal protein S12; Ancestral locus Anc_7.11; Belongs to the eukaryotic ribosomal protein eS12 family (145 aa)
     
 
  0.977
XP_003674904.1
40S ribosomal protein S26; Ancestral locus Anc_8.149; Belongs to the eukaryotic ribosomal protein eS26 family (119 aa)
     
 
  0.973
XP_003673128.1
Uncharacterized protein; Ancestral locus Anc_4.85 (105 aa)
     
 
  0.972
XP_003673046.1
Ribosomal protein; Ancestral locus Anc_6.237; Belongs to the universal ribosomal protein uL1 family (217 aa)
     
 
  0.972
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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