STRINGSTRING
XP_003673390.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673390.1" - Uncharacterized protein in Naumovozyma castellii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673390.1Uncharacterized protein; Ancestral locus Anc_2.458 (359 aa)    
Predicted Functional Partners:
XP_003675015.1
Uncharacterized protein; Ancestral locus Anc_8.165 (539 aa)
     
  0.988
XP_003673235.1
Uncharacterized protein; Ancestral locus Anc_4.321 (367 aa)
     
 
  0.921
XP_003677799.1
Uncharacterized protein; Ancestral locus Anc_6.121 (594 aa)
       
 
  0.906
UNG1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (330 aa)
   
 
  0.858
NTG1
Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (446 aa)
   
 
  0.843
XP_003675482.1
DNA polymerase; Ancestral locus Anc_8.694 (1473 aa)
     
 
  0.840
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (379 aa)
     
 
  0.824
XP_003675377.1
Uncharacterized protein; Ancestral locus Anc_8.874 (205 aa)
     
 
  0.802
XP_003674181.1
Uncharacterized protein; Ancestral locus Anc_7.173 (143 aa)
     
 
  0.788
XP_003676821.1
Uncharacterized protein; Ancestral locus Anc_5.51 (1000 aa)
     
 
  0.778
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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