STRINGSTRING
XP_003673412.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673412.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673412.1Uncharacterized protein; Ancestral locus Anc_6.301 (153 aa)    
Predicted Functional Partners:
XP_003674434.1
Uncharacterized protein; Ancestral locus Anc_7.503 (678 aa)
       
 
  0.967
XP_003675801.1
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (216 aa)
       
 
  0.959
XP_003677682.1
Uncharacterized protein; Ancestral locus Anc_7.524 (152 aa)
       
 
  0.951
XP_003678351.1
Uncharacterized protein; Ancestral locus Anc_8.15 (1080 aa)
       
 
  0.948
XP_003676259.1
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (128 aa)
       
 
  0.945
XP_003677115.1
Uncharacterized protein; Ancestral locus Anc_5.329 (151 aa)
       
 
  0.933
XP_003674460.1
Uncharacterized protein; Ancestral locus Anc_2.436 (123 aa)
       
 
  0.929
XP_003676873.1
Uncharacterized protein; Ancestral locus Anc_6.65 (281 aa)
       
 
  0.927
XP_003676671.1
Uncharacterized protein; Ancestral locus Anc_7.425 (214 aa)
       
 
  0.925
XP_003673077.1
Uncharacterized protein; Ancestral locus Anc_5.299 (223 aa)
       
 
  0.923
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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