Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein; Ancestral locus Anc_6.378 (577 aa)
Predicted Functional Partners:
Uncharacterized protein; Ancestral locus Anc_8.202; Belongs to the peptidase C19 family (917 aa)
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl-tRNAi to 40S ribosomal subunits. In contrast to the eIF- 2 complex, it binds methionyl-tRNAi to 40 S subunits in a codon- dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40 S subunits in a GTP-dependent manner. May act by impiging the expression of specific proteins (632 aa)
Uncharacterized protein; Ancestral locus Anc_3.519 (167 aa)
Uncharacterized protein; Ancestral locus Anc_5.382 (443 aa)
Uncharacterized protein; Ancestral locus Anc_3.379 (300 aa)
Uncharacterized protein; Ancestral locus Anc_2.559 (1281 aa)
Uncharacterized protein; Ancestral locus Anc_7.163 (1146 aa)
Uncharacterized protein; Ancestral locus Anc_7.537 (755 aa)
Uncharacterized protein; Ancestral locus Anc_5.182 (735 aa)
Uncharacterized protein; Ancestral locus Anc_5.683 (1114 aa)
Your Current Organism:
NCBI taxonomy Id: 27288 Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti