STRINGSTRING
XP_003673595.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673595.1" - Uncharacterized protein in Naumovozyma castellii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673595.1Uncharacterized protein; Ancestral locus Anc_4.114 (828 aa)    
Predicted Functional Partners:
XP_003678261.1
Uncharacterized protein; Ancestral locus Anc_3.85 (661 aa)
     
 
  0.780
XP_003675069.1
Uncharacterized protein; Ancestral locus Anc_2.306 (443 aa)
     
 
  0.633
XP_003673107.1
Uncharacterized protein; Ancestral locus Anc_5.205 (75 aa)
       
 
  0.616
XP_003674344.1
Uncharacterized protein; Ancestral locus Anc_7.336; Belongs to the DEAD box helicase family (510 aa)
     
 
  0.601
XP_003678036.1
Uncharacterized protein; Ancestral locus Anc_7.27 (562 aa)
     
 
  0.564
XP_003673241.1
Uncharacterized protein; Ancestral locus Anc_4.26 (813 aa)
     
 
  0.540
XP_003677340.1
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane (616 aa)
     
   
  0.539
PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome- mediated 3’-5’ exonucleolytic degradation, or deadenlyation- dependent mRNA decaping and subsequen [...] (1131 aa)
     
 
  0.523
XP_003673510.1
Uncharacterized protein; Ancestral locus Anc_6.379 (414 aa)
     
 
  0.516
XP_003675796.1
Uncharacterized protein; Ancestral locus Anc_3.20; Belongs to the eukaryotic initiation factor 4E family (211 aa)
       
 
  0.514
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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