STRINGSTRING
XP_003673623.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673623.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673623.1Uncharacterized protein; Ancestral locus Anc_5.194 (384 aa)    
Predicted Functional Partners:
XP_003676713.1
Uncharacterized protein; Ancestral locus Anc_7.356 (607 aa)
     
   
  0.872
XP_003675594.1
Uncharacterized protein; Ancestral locus Anc_8.491 (702 aa)
     
        0.864
XP_003676316.1
Uncharacterized protein; Ancestral locus Anc_6.204; Belongs to the DEAD box helicase family (519 aa)
     
        0.862
XP_003678261.1
Uncharacterized protein; Ancestral locus Anc_3.85 (661 aa)
     
        0.861
XP_003677526.1
Uncharacterized protein; Ancestral locus Anc_2.221 (286 aa)
     
        0.861
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (456 aa)
     
        0.860
XP_003674174.1
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (239 aa)
     
   
  0.859
XP_003677036.1
Uncharacterized protein; Ancestral locus Anc_2.401 (511 aa)
     
        0.859
XP_003674531.1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (203 aa)
     
        0.859
XP_003677117.1
Uncharacterized protein; Ancestral locus Anc_5.338 (460 aa)
     
        0.858
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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