STRINGSTRING
XP_003673624.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673624.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673624.1Uncharacterized protein; Ancestral locus Anc_5.193 (747 aa)    
Predicted Functional Partners:
XP_003673461.1
Uncharacterized protein; Ancestral locus Anc_4.142 (412 aa)
     
 
  0.999
XP_003677897.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1224 aa)
     
 
  0.996
XP_003676322.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (122 aa)
     
 
  0.996
XP_003674328.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1716 aa)
     
 
  0.995
XP_003676613.1
Uncharacterized protein; Ancestral locus Anc_7.194 (318 aa)
     
 
  0.989
XP_003675272.1
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (326 aa)
     
 
  0.988
XP_003673427.1
Uncharacterized protein; Ancestral locus Anc_2.528 (471 aa)
     
 
  0.983
XP_003678101.1
Uncharacterized protein; Ancestral locus Anc_3.394 (370 aa)
     
 
  0.981
XP_003675401.1
Uncharacterized protein; Ancestral locus Anc_8.839 (725 aa)
     
 
  0.952
XP_003674043.1
Uncharacterized protein; Ancestral locus Anc_3.345 (338 aa)
       
 
  0.951
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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