STRINGSTRING
XP_003673712.1 protein (Naumovozyma castellii) - STRING interaction network
"XP_003673712.1" - Uncharacterized protein in Naumovozyma castellii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003673712.1Uncharacterized protein; Ancestral locus Anc_2.489 (992 aa)    
Predicted Functional Partners:
XP_003677830.1
Uncharacterized protein; Ancestral locus Anc_5.363 (1053 aa)
     
  0.998
XP_003674980.1
Uncharacterized protein; Ancestral locus Anc_3.140 (429 aa)
     
  0.995
XP_003674779.1
Uncharacterized protein; Ancestral locus Anc_8.370 (682 aa)
     
 
  0.985
XP_003673982.1
Uncharacterized protein; Ancestral locus Anc_3.249; Belongs to the DEAD box helicase family (399 aa)
     
 
  0.957
XP_003675771.1
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1488 aa)
     
 
  0.927
XP_003674752.1
Uncharacterized protein; Ancestral locus Anc_8.415 (870 aa)
     
 
  0.910
XP_003675478.1
Uncharacterized protein; Ancestral locus Anc_8.699 (582 aa)
     
 
  0.903
XP_003677489.1
Uncharacterized protein; Ancestral locus Anc_2.155 (864 aa)
     
 
  0.901
XP_003677565.1
Uncharacterized protein; Ancestral locus Anc_1.442 (573 aa)
   
 
  0.891
XP_003678243.1
Uncharacterized protein; Ancestral locus Anc_3.121 (437 aa)
     
 
  0.839
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 27288
Other names: AS 2.2404, ATCC 76901, CBS 4309, CCRC 22586, DBVPG 6298, N. castellii, NRRL Y-12630, Naumovia castellii, Naumovozyma castellii, Naumovozyma castellii Kurtzman 2008, Saccharomyces castellii, Saccharomyces castellii Capriotti
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