STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE84306.1Protein of unknown function DUF167; Belongs to the UPF0235 family. (83 aa)    
Predicted Functional Partners:
ADE84305.1
Nitroreductase family protein.
       0.681
ADE84304.1
Protein of unknown function DUF540.
       0.665
ADE87123.1
Membrane protein, putative.
  
     0.490
ADE84308.1
Protein of unknown function DUF1523.
 
     0.456
ADE86722.1
Conserved hypothetical protein.
  
     0.456
ADE84189.1
Conserved hypothetical protein.
  
     0.455
nifJ
Pyruvate-flavodoxin oxidoreductase.
       0.426
ADE86796.1
Membrane protein, putative.
  
     0.409
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.