Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADE83786.1 | cycA1 | RCAP_rcc00021 | RCAP_rcc01240 | Cytochrome c peroxidase. | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | 0.864 |
| ADE83786.1 | petB | RCAP_rcc00021 | RCAP_rcc02769 | Cytochrome c peroxidase. | Ubiquinol--cytochrome-c reductase, cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.499 |
| ADE83786.1 | petC | RCAP_rcc00021 | RCAP_rcc02770 | Cytochrome c peroxidase. | Ubiquinol--cytochrome-c reductase, cytochrome c1 subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c. | 0.460 |
| ccoP | cycA1 | RCAP_rcc01160 | RCAP_rcc01240 | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | 0.872 |
| ccoP | cycA2 | RCAP_rcc01160 | RCAP_rcc01656 | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | Cytochrome c2-2. | 0.689 |
| ccoP | cycY | RCAP_rcc01160 | RCAP_rcc02501 | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | Cytochrome c, class I; Electron transfer pathways that operates during photosynthesis. | 0.947 |
| ccoP | petA | RCAP_rcc01160 | RCAP_rcc02768 | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | Ubiquinol--cytochrome-c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. Belongs to the Rieske iron-sulfur protein family. | 0.992 |
| ccoP | petB | RCAP_rcc01160 | RCAP_rcc02769 | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | Ubiquinol--cytochrome-c reductase, cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.990 |
| ccoP | petC | RCAP_rcc01160 | RCAP_rcc02770 | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | Ubiquinol--cytochrome-c reductase, cytochrome c1 subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c. | 0.972 |
| cycA1 | ADE83786.1 | RCAP_rcc01240 | RCAP_rcc00021 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Cytochrome c peroxidase. | 0.864 |
| cycA1 | ccoP | RCAP_rcc01240 | RCAP_rcc01160 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | 0.872 |
| cycA1 | cycA2 | RCAP_rcc01240 | RCAP_rcc01656 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Cytochrome c2-2. | 0.978 |
| cycA1 | cycY | RCAP_rcc01240 | RCAP_rcc02501 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Cytochrome c, class I; Electron transfer pathways that operates during photosynthesis. | 0.937 |
| cycA1 | petA | RCAP_rcc01240 | RCAP_rcc02768 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Ubiquinol--cytochrome-c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. Belongs to the Rieske iron-sulfur protein family. | 0.944 |
| cycA1 | petB | RCAP_rcc01240 | RCAP_rcc02769 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Ubiquinol--cytochrome-c reductase, cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.901 |
| cycA1 | petC | RCAP_rcc01240 | RCAP_rcc02770 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Ubiquinol--cytochrome-c reductase, cytochrome c1 subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c. | 0.982 |
| cycA1 | pufL | RCAP_rcc01240 | RCAP_rcc00693 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Photosynthetic reaction center, L subunit. | 0.929 |
| cycA1 | pufM | RCAP_rcc01240 | RCAP_rcc00694 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Photosynthetic reaction center, M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.924 |
| cycA1 | puhA | RCAP_rcc01240 | RCAP_rcc00659 | Cytochrome c2-1; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria. | Photosynthetic reaction center, H subunit. | 0.940 |
| cycA2 | ccoP | RCAP_rcc01656 | RCAP_rcc01160 | Cytochrome c2-2. | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. CcoP subunit is required for transferring electrons from donor cytochrome c via its heme groups to CcoO subunit. From there, electrons are shuttled to the catalytic binuclear center of CcoN subunit where oxygen reduction takes place. The complex also functions as a proton pump. | 0.689 |
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