STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livM2Branched-chain amino acid ABC transporter, permease protein LivM-2; Belongs to the binding-protein-dependent transport system permease family. (323 aa)    
Predicted Functional Partners:
livH2
Branched-chain amino acid ABC transporter, permease protein LivH-2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livG2
Branched-chain amino acid ABC transporter, ATP-binding protein LivG-2.
 
 0.995
livF2
Branched-chain amino acid ABC transporter, ATP-binding protein LivF-2.
 
 0.995
livJ
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein LivJ.
 
 
 0.988
livH1
Branched-chain amino acid ABC transporter, permease protein LivH-1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
livF1
Branched-chain amino acid ABC transporter, ATP-binding protein LivF-1.
 
 0.974
livG1
Branched-chain amino acid ABC transporter, ATP-binding protein LivG-1.
 
 0.971
livG3
Branched-chain amino acid ABC transporter, ATP-binding protein LivG-3.
 
 0.970
livM1
Branched-chain amino acid ABC transporter, permease protein LivM-1; Belongs to the binding-protein-dependent transport system permease family.
  
  
  0.969
livF3
Branched-chain amino acid ABC transporter, ATP-binding protein LivF-3.
 
 0.968
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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