Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADE84206.1 | ADE85251.1 | RCAP_rcc00441 | RCAP_rcc01506 | Sensor histidine kinase/response regulator receiver protein. | Signal transduction histidine kinase. | 0.958 |
ADE84206.1 | ADE85405.1 | RCAP_rcc00441 | RCAP_rcc01660 | Sensor histidine kinase/response regulator receiver protein. | Signal transduction histidine kinase. | 0.669 |
ADE84206.1 | ADE86168.1 | RCAP_rcc00441 | RCAP_rcc02438 | Sensor histidine kinase/response regulator receiver protein. | AMP-dependent synthetase and ligase family protein. | 0.587 |
ADE84206.1 | ADE86275.1 | RCAP_rcc00441 | RCAP_rcc02545 | Sensor histidine kinase/response regulator receiver protein. | Sensor histidine kinase/response regulator receiver protein. | 0.948 |
ADE84206.1 | ADE86792.1 | RCAP_rcc00441 | RCAP_rcc03068 | Sensor histidine kinase/response regulator receiver protein. | Cache sensor protein. | 0.728 |
ADE84206.1 | ADE86830.1 | RCAP_rcc00441 | RCAP_rcc03106 | Sensor histidine kinase/response regulator receiver protein. | enoyl-CoA hydratase/isomerase family protein. | 0.658 |
ADE84206.1 | ADE87176.1 | RCAP_rcc00441 | RCAP_rcc03452 | Sensor histidine kinase/response regulator receiver protein. | Sensor histidine kinase/response regulator receiver protein. | 0.744 |
ADE85251.1 | ADE84206.1 | RCAP_rcc01506 | RCAP_rcc00441 | Signal transduction histidine kinase. | Sensor histidine kinase/response regulator receiver protein. | 0.958 |
ADE85251.1 | ADE85405.1 | RCAP_rcc01506 | RCAP_rcc01660 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.948 |
ADE85251.1 | ADE86168.1 | RCAP_rcc01506 | RCAP_rcc02438 | Signal transduction histidine kinase. | AMP-dependent synthetase and ligase family protein. | 0.657 |
ADE85251.1 | ADE86275.1 | RCAP_rcc01506 | RCAP_rcc02545 | Signal transduction histidine kinase. | Sensor histidine kinase/response regulator receiver protein. | 0.972 |
ADE85251.1 | ADE86792.1 | RCAP_rcc01506 | RCAP_rcc03068 | Signal transduction histidine kinase. | Cache sensor protein. | 0.958 |
ADE85251.1 | ADE86830.1 | RCAP_rcc01506 | RCAP_rcc03106 | Signal transduction histidine kinase. | enoyl-CoA hydratase/isomerase family protein. | 0.667 |
ADE85251.1 | ADE87176.1 | RCAP_rcc01506 | RCAP_rcc03452 | Signal transduction histidine kinase. | Sensor histidine kinase/response regulator receiver protein. | 0.957 |
ADE85405.1 | ADE84206.1 | RCAP_rcc01660 | RCAP_rcc00441 | Signal transduction histidine kinase. | Sensor histidine kinase/response regulator receiver protein. | 0.669 |
ADE85405.1 | ADE85251.1 | RCAP_rcc01660 | RCAP_rcc01506 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.948 |
ADE85405.1 | ADE86168.1 | RCAP_rcc01660 | RCAP_rcc02438 | Signal transduction histidine kinase. | AMP-dependent synthetase and ligase family protein. | 0.587 |
ADE85405.1 | ADE86275.1 | RCAP_rcc01660 | RCAP_rcc02545 | Signal transduction histidine kinase. | Sensor histidine kinase/response regulator receiver protein. | 0.942 |
ADE85405.1 | ADE86792.1 | RCAP_rcc01660 | RCAP_rcc03068 | Signal transduction histidine kinase. | Cache sensor protein. | 0.692 |
ADE85405.1 | ADE86830.1 | RCAP_rcc01660 | RCAP_rcc03106 | Signal transduction histidine kinase. | enoyl-CoA hydratase/isomerase family protein. | 0.658 |
page 1 of 4