Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bchB | bchC | RSP_0286 | RSP_0263 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | 0.916 |
| bchB | bchF | RSP_0286 | RSP_0284 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | IMG reference gene:2512955291; PFAM: 2-vinyl bacteriochlorophyllide hydratase (BCHF); TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase. | 0.998 |
| bchB | bchG | RSP_0286 | RSP_0279 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Chlorophyll synthase; Catalyzes the esterification of bacteriochlorophyllide a by geranylgeraniol-PPi. | 0.998 |
| bchB | bchL | RSP_0286 | RSP_0288 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.999 |
| bchB | bchN | RSP_0286 | RSP_0285 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Ferredoxin protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.999 |
| bchB | bchX | RSP_0286 | RSP_0262 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Chlorophyllide reductase, BchX subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole. | 0.994 |
| bchB | bchY | RSP_0286 | RSP_0261 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Chlorophyllide reductase, BchY subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole. | 0.991 |
| bchB | bchZ | RSP_0286 | RSP_0260 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | Putative chlorophyllide reductase, BchZ subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole; Belongs to the ChlB/BchB/BchZ family. | 0.979 |
| bchB | pufL | RSP_0286 | RSP_0257 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | PufL, Photosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.853 |
| bchB | pufM | RSP_0286 | RSP_0256 | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | PufM, photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.880 |
| bchC | bchB | RSP_0263 | RSP_0286 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.916 |
| bchC | bchF | RSP_0263 | RSP_0284 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | IMG reference gene:2512955291; PFAM: 2-vinyl bacteriochlorophyllide hydratase (BCHF); TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase. | 0.997 |
| bchC | bchG | RSP_0263 | RSP_0279 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Chlorophyll synthase; Catalyzes the esterification of bacteriochlorophyllide a by geranylgeraniol-PPi. | 0.992 |
| bchC | bchL | RSP_0263 | RSP_0288 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.870 |
| bchC | bchN | RSP_0263 | RSP_0285 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Ferredoxin protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.929 |
| bchC | bchX | RSP_0263 | RSP_0262 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Chlorophyllide reductase, BchX subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole. | 0.999 |
| bchC | bchY | RSP_0263 | RSP_0261 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Chlorophyllide reductase, BchY subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole. | 0.998 |
| bchC | bchZ | RSP_0263 | RSP_0260 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | Putative chlorophyllide reductase, BchZ subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole; Belongs to the ChlB/BchB/BchZ family. | 0.998 |
| bchC | pufL | RSP_0263 | RSP_0257 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | PufL, Photosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.882 |
| bchC | pufM | RSP_0263 | RSP_0256 | Chlorophyll synthesis pathway, bchC; This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis. | PufM, photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.889 |
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