STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0421Bacterial lipocalin; IMG reference gene:2512955434; PFAM: Lipocalin-like domain. (166 aa)    
Predicted Functional Partners:
RSP_0422
Hypothetical protein; IMG reference gene:2512955435.
  
    0.803
RSP_0420
Hypothetical protein; IMG reference gene:2512955433.
  
    0.743
RSP_1938
Hypothetical protein; IMG reference gene:2512953851; truncated by 17 aa.
  
    0.722
RSP_6052
Hypothetical protein; IMG reference gene:2512954373.
  
     0.626
RSP_0423
Aldo/keto reductase; IMG reference gene:2512955436; PFAM: Aldo/keto reductase family.
  
  
 0.621
RSP_0977
Hypothetical protein; IMG reference gene:2512956014.
  
     0.600
thiP
IMG reference gene:2512956438; TIGRFAM: thiamine ABC transporter, permease protein.
  
    0.506
RSP_0678
Putative membrane protein; IMG reference gene:2512955698; PFAM: Predicted membrane protein (DUF2339).
 
    0.482
RSP_3067
Hypothetical protein; IMG reference gene:2512956568.
  
     0.478
RSP_1840
Hypothetical protein; IMG reference gene:2512953749.
  
     0.477
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.