node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSP_1056 | RSP_6122 | RSP_1056 | RSP_6122 | Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. | IMG reference gene:2512955649; PFAM: Protein of unknown function (DUF2948). | 0.727 |
RSP_1056 | prrA | RSP_1056 | RSP_1518 | Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. | PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes; Member of the two-component regulatory system RegB/RegA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in response to a decrease in oxygen tension. | 0.702 |
RSP_1056 | prrB | RSP_1056 | RSP_1520 | Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. | Sensor histidine kinase PrrB (RegB); Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as well as in regulation of expression of genes involved in alternative CO2 fixation pathways. Phosphorylates RegA/PrrA. | 0.734 |
RSP_6122 | RSP_1056 | RSP_6122 | RSP_1056 | IMG reference gene:2512955649; PFAM: Protein of unknown function (DUF2948). | Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. | 0.727 |
RSP_6122 | prrA | RSP_6122 | RSP_1518 | IMG reference gene:2512955649; PFAM: Protein of unknown function (DUF2948). | PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes; Member of the two-component regulatory system RegB/RegA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in response to a decrease in oxygen tension. | 0.695 |
RSP_6122 | prrB | RSP_6122 | RSP_1520 | IMG reference gene:2512955649; PFAM: Protein of unknown function (DUF2948). | Sensor histidine kinase PrrB (RegB); Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as well as in regulation of expression of genes involved in alternative CO2 fixation pathways. Phosphorylates RegA/PrrA. | 0.735 |
appA | fnrL | RSP_1565 | RSP_0698 | IMG reference gene:2512953460; PFAM: Sensors of blue-light using FAD. | Crp-Fnr regulatory protein (FnrL); Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes. | 0.777 |
appA | ppsR | RSP_1565 | RSP_0282 | IMG reference gene:2512953460; PFAM: Sensors of blue-light using FAD. | Transcriptional regulator, PpsR; IMG reference gene:2512955289; PFAM: Bacterial regulatory protein, Fis family; TIGRFAM: transcriptional regulator PpsR. | 0.997 |
appA | prrA | RSP_1565 | RSP_1518 | IMG reference gene:2512953460; PFAM: Sensors of blue-light using FAD. | PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes; Member of the two-component regulatory system RegB/RegA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in response to a decrease in oxygen tension. | 0.828 |
appA | prrB | RSP_1565 | RSP_1520 | IMG reference gene:2512953460; PFAM: Sensors of blue-light using FAD. | Sensor histidine kinase PrrB (RegB); Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as well as in regulation of expression of genes involved in alternative CO2 fixation pathways. Phosphorylates RegA/PrrA. | 0.812 |
cbbR | nifA | RSP_1286 | RSP_0547 | RuBisCO operon transcriptional regulator, CbbR; IMG reference gene:2512956331; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. | NifA transcriptional activator; IMG reference gene:2512955560; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein. | 0.411 |
cbbR | prrA | RSP_1286 | RSP_1518 | RuBisCO operon transcriptional regulator, CbbR; IMG reference gene:2512956331; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. | PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes; Member of the two-component regulatory system RegB/RegA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in response to a decrease in oxygen tension. | 0.950 |
cbbR | prrB | RSP_1286 | RSP_1520 | RuBisCO operon transcriptional regulator, CbbR; IMG reference gene:2512956331; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. | Sensor histidine kinase PrrB (RegB); Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as well as in regulation of expression of genes involved in alternative CO2 fixation pathways. Phosphorylates RegA/PrrA. | 0.587 |
fnrL | appA | RSP_0698 | RSP_1565 | Crp-Fnr regulatory protein (FnrL); Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes. | IMG reference gene:2512953460; PFAM: Sensors of blue-light using FAD. | 0.777 |
fnrL | ppsR | RSP_0698 | RSP_0282 | Crp-Fnr regulatory protein (FnrL); Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes. | Transcriptional regulator, PpsR; IMG reference gene:2512955289; PFAM: Bacterial regulatory protein, Fis family; TIGRFAM: transcriptional regulator PpsR. | 0.822 |
fnrL | prrA | RSP_0698 | RSP_1518 | Crp-Fnr regulatory protein (FnrL); Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes. | PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes; Member of the two-component regulatory system RegB/RegA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in response to a decrease in oxygen tension. | 0.827 |
fnrL | prrB | RSP_0698 | RSP_1520 | Crp-Fnr regulatory protein (FnrL); Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes. | Sensor histidine kinase PrrB (RegB); Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as well as in regulation of expression of genes involved in alternative CO2 fixation pathways. Phosphorylates RegA/PrrA. | 0.792 |
hupT | nifA | RSP_0491 | RSP_0547 | Hydrogen uptake histidine-kinase; IMG reference gene:2512955502; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold. | NifA transcriptional activator; IMG reference gene:2512955560; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein. | 0.715 |
hupT | prrA | RSP_0491 | RSP_1518 | Hydrogen uptake histidine-kinase; IMG reference gene:2512955502; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold. | PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes; Member of the two-component regulatory system RegB/RegA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in response to a decrease in oxygen tension. | 0.733 |
nifA | cbbR | RSP_0547 | RSP_1286 | NifA transcriptional activator; IMG reference gene:2512955560; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein. | RuBisCO operon transcriptional regulator, CbbR; IMG reference gene:2512956331; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. | 0.411 |