STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3609ParB-like nuclease; IMG reference gene:2512957124; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins. (606 aa)    
Predicted Functional Partners:
RSP_1423
ParA family ATPase; IMG reference gene:2512957358; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.643
RSP_1042
ATPase involved in chromosome partitioning; IMG reference gene:2512956082; PFAM: ATPase MipZ.
 
 
 0.622
RSP_3610
Hypothetical protein; IMG reference gene:2512957125; PFAM: Uncharacterized protein conserved in bacteria (DUF2312).
 
     0.575
gidB
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.563
RSP_3608
Site-specific recombinase, DNA invertase Pin; IMG reference gene:2512957123; PFAM: Recombinase; Resolvase, N terminal domain.
 
     0.560
slp
Slp; IMG reference gene:2512955034; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.558
parA
Chromosome segregation ATPase; IMG reference gene:2512956271; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.558
RSP_6186
Hypothetical protein; IMG reference gene:2512957126.
       0.500
RSP_6187
Hypothetical protein; IMG reference gene:2512957127.
       0.500
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.