STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP093VACJ LIPOPROTEIN PRECURSOR (vacJ); Belongs to the MlaA family. (251 aa)    
Predicted Functional Partners:
RP094
Unknown.
 
 
 
 0.940
RP068
Unknown.
 
 
 
 0.854
RP724
Unknown.
 
   
 0.839
RP092
Unknown.
       0.785
RP096
Unknown; Could be part of an ABC transporter complex; Belongs to the MlaE permease family.
 
   
 0.554
RP097
POSSIBLE RIBONUCLEOTIDE TRANSPORT ATP-BINDING PROTEIN MKL (mkl).
 
   
 0.537
RP091
ASPARTATE AMINOTRANSFERASE A (aatA); Catalyzes the reversible conversion of aspartate and 2- oxoglutarate to glutamate and oxaloacetate. Can also transaminate prephenate in the presence of glutamate. Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
       0.513
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.