STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP107Unknown. (888 aa)    
Predicted Functional Partners:
RP289
Unknown.
 
  
 0.930
RP784
VIRB4 PROTEIN PRECURSOR (virB4).
 
  
 0.896
RP103
VIRB4 PROTEIN PRECURSOR (virB4).
 
  
 0.879
RP291
VIRB10 PROTEIN (virB10).
 
  
 0.866
RP286
PROBABLE CONJUGAL TRANSFER PROTEIN TRBG PRECURSOR (trbG).
 
 
 0.807
RP068
Unknown.
  
    0.797
RP451
CELL SURFACE ANTIGEN (sca3).
  
    0.784
RP704
CELL SURFACE ANTIGEN (sca5); The 120 kDa surface-exposed protein is a major structural protein which may play a role as a rickettsial virulence factor and/or immunogen during infection.
  
    0.783
RP108
Unknown.
 
 
 
0.780
RP092
Unknown.
  
     0.774
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.