Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RP032 | RP330 | gene:17555115 | gene:17555410 | Unknown; Belongs to the UPF0301 (AlgH) family. | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.788 |
| RP168 | RP330 | gene:17555251 | gene:17555410 | Unknown; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity). | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.458 |
| RP190 | RP330 | gene:17555272 | gene:17555410 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.419 |
| RP329 | RP330 | gene:17555409 | gene:17555410 | Unknown. | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.566 |
| RP329 | RP331 | gene:17555409 | gene:17555411 | Unknown. | Unknown. | 0.468 |
| RP329 | RP335 | gene:17555409 | gene:17555415 | Unknown. | Unknown. | 0.552 |
| RP330 | RP032 | gene:17555410 | gene:17555115 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Unknown; Belongs to the UPF0301 (AlgH) family. | 0.788 |
| RP330 | RP168 | gene:17555410 | gene:17555251 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Unknown; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity). | 0.458 |
| RP330 | RP190 | gene:17555410 | gene:17555272 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | 0.419 |
| RP330 | RP329 | gene:17555410 | gene:17555409 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Unknown. | 0.566 |
| RP330 | RP331 | gene:17555410 | gene:17555411 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Unknown. | 0.631 |
| RP330 | RP335 | gene:17555410 | gene:17555415 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Unknown. | 0.486 |
| RP330 | RP510 | gene:17555410 | gene:17555590 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE (miaA); Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.693 |
| RP330 | RP545 | gene:17555410 | gene:17555625 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Unknown. | 0.563 |
| RP330 | RP856 | gene:17555410 | gene:17555925 | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | ALANYL-TRNA SYNTHETASE (alaS); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.712 |
| RP331 | RP329 | gene:17555411 | gene:17555409 | Unknown. | Unknown. | 0.468 |
| RP331 | RP330 | gene:17555411 | gene:17555410 | Unknown. | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.631 |
| RP335 | RP329 | gene:17555415 | gene:17555409 | Unknown. | Unknown. | 0.552 |
| RP335 | RP330 | gene:17555415 | gene:17555410 | Unknown. | Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.486 |
| RP335 | RP510 | gene:17555415 | gene:17555590 | Unknown. | TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE (miaA); Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.422 |
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