Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP020 | RP068 | gene:17555103 | gene:17555151 | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unknown. | 0.621 |
RP020 | RP264 | gene:17555103 | gene:17555345 | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unknown. | 0.751 |
RP020 | RP347 | gene:17555103 | gene:17555427 | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | OUTER MEMBRANE ASSEMBLY PROTEIN (asmA). | 0.478 |
RP020 | RP358 | gene:17555103 | gene:17555438 | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unknown. | 0.736 |
RP020 | RP673 | gene:17555103 | gene:17555750 | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unknown. | 0.575 |
RP020 | RP780 | gene:17555103 | gene:17555849 | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unknown. | 0.662 |
RP068 | RP020 | gene:17555151 | gene:17555103 | Unknown. | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.621 |
RP068 | RP264 | gene:17555151 | gene:17555345 | Unknown. | Unknown. | 0.634 |
RP068 | RP335 | gene:17555151 | gene:17555415 | Unknown. | Unknown. | 0.804 |
RP068 | RP347 | gene:17555151 | gene:17555427 | Unknown. | OUTER MEMBRANE ASSEMBLY PROTEIN (asmA). | 0.730 |
RP068 | RP358 | gene:17555151 | gene:17555438 | Unknown. | Unknown. | 0.725 |
RP068 | RP673 | gene:17555151 | gene:17555750 | Unknown. | Unknown. | 0.770 |
RP068 | RP674 | gene:17555151 | gene:17555751 | Unknown. | Unknown; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.755 |
RP068 | RP780 | gene:17555151 | gene:17555849 | Unknown. | Unknown. | 0.771 |
RP264 | RP020 | gene:17555345 | gene:17555103 | Unknown. | ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.751 |
RP264 | RP068 | gene:17555345 | gene:17555151 | Unknown. | Unknown. | 0.634 |
RP264 | RP347 | gene:17555345 | gene:17555427 | Unknown. | OUTER MEMBRANE ASSEMBLY PROTEIN (asmA). | 0.539 |
RP264 | RP358 | gene:17555345 | gene:17555438 | Unknown. | Unknown. | 0.724 |
RP264 | RP359 | gene:17555345 | gene:17555439 | Unknown. | Unknown. | 0.409 |
RP264 | RP674 | gene:17555345 | gene:17555751 | Unknown. | Unknown; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.405 |
page 1 of 4