STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP358Unknown. (405 aa)    
Predicted Functional Partners:
RP335
Unknown.
 
  
 0.972
RP359
Unknown.
 
     0.839
RP333
CAPD PROTEIN (capD); Epimerizes UDP-galactose to UDP-glucose. May contribute to formation of LPS or the exopolysaccharide slime layer by providing UDP- galactose as a substrate for either molecule.
  
  
 0.789
RP780
Unknown.
 
     0.765
RP673
Unknown.
 
     0.752
RP020
ATP SYNTHASE B CHAIN PRECURSOR (atpF); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
 
     0.736
RP068
Unknown.
  
    0.725
RP674
Unknown; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.725
RP264
Unknown.
 
     0.724
RP347
OUTER MEMBRANE ASSEMBLY PROTEIN (asmA).
  
    0.723
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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