STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP420Unknown. (167 aa)    
Predicted Functional Partners:
RP774
Unknown.
  
     0.772
RP421
LEUCYL-TRNA SYNTHETASE (leuS); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.752
RP232
Unknown.
  
    0.702
RP193
Unknown.
  
     0.653
RP864
Unknown.
  
     0.644
RP616
Unknown.
  
     0.634
RP143
Unknown.
  
     0.630
RP358
Unknown.
  
     0.573
RP359
Unknown.
  
     0.485
RP565
PENICILLIN-BINDING PROTEIN (pbpA1).
  
     0.472
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.