Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP002 | RP005 | gene:17555085 | gene:17555088 | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | Unknown. | 0.924 |
RP002 | RP006 | gene:17555085 | gene:17555089 | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | Unknown. | 0.891 |
RP002 | RP327 | gene:17555085 | gene:17555407 | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | THIOREDOXIN PEROXIDASE 1 (tdpX1). | 0.828 |
RP002 | RP335 | gene:17555085 | gene:17555415 | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | Unknown. | 0.695 |
RP002 | RP445 | gene:17555085 | gene:17555525 | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | THIOREDOXIN REDUCTASE (trxB1). | 0.985 |
RP002 | RP514 | gene:17555085 | gene:17555594 | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | THIOREDOXIN REDUCTASE (trxB2). | 0.865 |
RP005 | RP002 | gene:17555088 | gene:17555085 | Unknown. | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | 0.924 |
RP005 | RP006 | gene:17555088 | gene:17555089 | Unknown. | Unknown. | 0.999 |
RP005 | RP199 | gene:17555088 | gene:17555280 | Unknown. | ADRENODOXIN PRECURSOR (adx1); Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions; Belongs to the adrenodoxin/putidaredoxin family. | 0.989 |
RP005 | RP327 | gene:17555088 | gene:17555407 | Unknown. | THIOREDOXIN PEROXIDASE 1 (tdpX1). | 0.601 |
RP005 | RP335 | gene:17555088 | gene:17555415 | Unknown. | Unknown. | 0.562 |
RP005 | RP418 | gene:17555088 | gene:17555498 | Unknown. | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (pheT); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.741 |
RP005 | RP445 | gene:17555088 | gene:17555525 | Unknown. | THIOREDOXIN REDUCTASE (trxB1). | 0.560 |
RP005 | RP495 | gene:17555088 | gene:17555575 | Unknown. | Unknown; Belongs to the glutamine synthetase family. | 0.733 |
RP005 | RP514 | gene:17555088 | gene:17555594 | Unknown. | THIOREDOXIN REDUCTASE (trxB2). | 0.560 |
RP006 | RP002 | gene:17555089 | gene:17555085 | Unknown. | THIOREDOXIN (trxA); Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). | 0.891 |
RP006 | RP005 | gene:17555089 | gene:17555088 | Unknown. | Unknown. | 0.999 |
RP006 | RP199 | gene:17555089 | gene:17555280 | Unknown. | ADRENODOXIN PRECURSOR (adx1); Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions; Belongs to the adrenodoxin/putidaredoxin family. | 0.989 |
RP006 | RP327 | gene:17555089 | gene:17555407 | Unknown. | THIOREDOXIN PEROXIDASE 1 (tdpX1). | 0.601 |
RP006 | RP335 | gene:17555089 | gene:17555415 | Unknown. | Unknown. | 0.491 |
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