Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP476 | RP477 | gene:17555556 | gene:17555557 | LIPOPOLYSACCHARIDE 1,2-GLUCOSYLTRANSFERASE (rfaJ). | ADP,ATP CARRIER PROTEIN (tlc3); Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism; Belongs to the ADP/ATP translocase tlc family. | 0.574 |
RP476 | RP478 | gene:17555556 | gene:17555558 | LIPOPOLYSACCHARIDE 1,2-GLUCOSYLTRANSFERASE (rfaJ). | Unknown. | 0.400 |
RP477 | RP476 | gene:17555557 | gene:17555556 | ADP,ATP CARRIER PROTEIN (tlc3); Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism; Belongs to the ADP/ATP translocase tlc family. | LIPOPOLYSACCHARIDE 1,2-GLUCOSYLTRANSFERASE (rfaJ). | 0.574 |
RP477 | RP478 | gene:17555557 | gene:17555558 | ADP,ATP CARRIER PROTEIN (tlc3); Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism; Belongs to the ADP/ATP translocase tlc family. | Unknown. | 0.520 |
RP478 | RP476 | gene:17555558 | gene:17555556 | Unknown. | LIPOPOLYSACCHARIDE 1,2-GLUCOSYLTRANSFERASE (rfaJ). | 0.400 |
RP478 | RP477 | gene:17555558 | gene:17555557 | Unknown. | ADP,ATP CARRIER PROTEIN (tlc3); Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism; Belongs to the ADP/ATP translocase tlc family. | 0.520 |
RP478 | RP479 | gene:17555558 | gene:17555559 | Unknown. | OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB); Belongs to the FPP/GGPP synthase family. | 0.560 |
RP479 | RP478 | gene:17555559 | gene:17555558 | OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB); Belongs to the FPP/GGPP synthase family. | Unknown. | 0.560 |