STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP560PROBABLE 3-HYDROXYACYL-COA DEHYDROGENASE B0272.3 (fadB); In the C-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (720 aa)    
Predicted Functional Partners:
RP737
ACETYL-COA ACETYLTRANSFERASE (fadA); Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
RP234
30S RIBOSOMAL PROTEIN S9 (rpsI); Belongs to the universal ribosomal protein uS9 family.
   
 
 0.996
RP620
2-ACYLGLYCEROPHOSPHOETHANOLAMINE ACYLTRANSFERASE (aas).
  
 
 0.992
RP879
50S RIBOSOMAL PROTEIN L33 (rpmG); Belongs to the bacterial ribosomal protein bL33 family.
   
 
 0.992
RP878
30S RIBOSOMAL PROTEIN S16 (rpsP); Belongs to the bacterial ribosomal protein bS16 family.
    
   0.991
RP035
ACETOACETYL-COA REDUCTASE (phbB).
  
 0.986
RP619
PROPIONYL-COA CARBOXYLASE BETA CHAIN PRECURSOR (pccB).
  
 0.986
RP456
RIBOSOMAL PROTEIN L36 (rpmJ); Belongs to the bacterial ribosomal protein bL36 family.
    
   0.982
RP618
PROPIONYL-COA CARBOXYLASE ALPHA CHAIN PRECURSOR (pccA).
  
 0.977
RP634
50S RIBOSOMAL PROTEIN L17 (rplQ).
    
   0.976
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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