Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP190 | RP561 | gene:17555272 | gene:17555641 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | Unknown. | 0.581 |
RP190 | RP678 | gene:17555272 | gene:17555755 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | Unknown. | 0.501 |
RP190 | RP679 | gene:17555272 | gene:17555756 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | Unknown. | 0.501 |
RP190 | RP680 | gene:17555272 | gene:17555757 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.909 |
RP190 | RP686 | gene:17555272 | gene:17555763 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.558 |
RP335 | RP680 | gene:17555415 | gene:17555757 | Unknown. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.757 |
RP335 | RP686 | gene:17555415 | gene:17555763 | Unknown. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.733 |
RP335 | RP841 | gene:17555415 | gene:17555910 | Unknown. | 5-AMINOLEVULINIC ACID SYNTHASE (hemA); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.515 |
RP335 | RP847 | gene:17555415 | gene:17555916 | Unknown. | POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK); Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; In the C-terminal section; belongs to the class I-like SAM- binding methyltransferase superfamily. TrmB family. | 0.808 |
RP466 | RP680 | gene:17555546 | gene:17555757 | PORPHOBILINOGEN DEAMINASE (hemC); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.680 |
RP466 | RP686 | gene:17555546 | gene:17555763 | PORPHOBILINOGEN DEAMINASE (hemC); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.776 |
RP466 | RP841 | gene:17555546 | gene:17555910 | PORPHOBILINOGEN DEAMINASE (hemC); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 5-AMINOLEVULINIC ACID SYNTHASE (hemA); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.756 |
RP561 | RP190 | gene:17555641 | gene:17555272 | Unknown. | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | 0.581 |
RP561 | RP678 | gene:17555641 | gene:17555755 | Unknown. | Unknown. | 0.631 |
RP561 | RP679 | gene:17555641 | gene:17555756 | Unknown. | Unknown. | 0.487 |
RP561 | RP680 | gene:17555641 | gene:17555757 | Unknown. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.939 |
RP561 | RP686 | gene:17555641 | gene:17555763 | Unknown. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.711 |
RP561 | RP821 | gene:17555641 | gene:17555890 | Unknown. | Unknown; Belongs to the UbiD family. | 0.701 |
RP678 | RP190 | gene:17555755 | gene:17555272 | Unknown. | UBIQUINONE BIOSYNTHESIS PROTEIN COQ7 (coq7); Belongs to the COQ7 family. | 0.501 |
RP678 | RP561 | gene:17555755 | gene:17555641 | Unknown. | Unknown. | 0.631 |
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