STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP779UDP-GLUCOSE 6-DEHYDROGENASE (udg); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (434 aa)    
Predicted Functional Partners:
RP335
Unknown.
  
  
 0.965
RP333
CAPD PROTEIN (capD); Epimerizes UDP-galactose to UDP-glucose. May contribute to formation of LPS or the exopolysaccharide slime layer by providing UDP- galactose as a substrate for either molecule.
  
 
 0.938
RP249
D-ALANINE--D-ALANINE LIGASE (ddlB); Cell wall formation.
     
 0.753
RP250
CELL DIVISION PROTEIN FTSQ (ftsQ); Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
      
 0.693
RP414
CAPM PROTEIN (capM2).
 
  
 0.640
RP336
Unknown.
  
  
 0.583
RP340
Unknown.
  
  
 0.583
RP344
CAPM PROTEIN (capM1).
  
  
 0.583
RP337
Unknown.
  
  
 0.579
RP509
PHOSPHOMANNOMUTASE (exoC).
  
  
 0.539
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.